Work:

doi:10.

Blog posts

• TODO: April 2nd, defend my PhD work (01 Mar 2008)
  
• Automatic Classification of thousands of Crystal Structures (24 Aug 2007)
  
• Going to the German Chemoinformatics Conference (11 Nov 2005)
  
• Subset selection: mind the complexity (23 Dec 2005)
  
• TODO: April 2nd, defend my PhD work (01 Mar 2008)
  
• 1D NMR Spectra do not work in QSPR (27 Jan 2006)
  
• CrossRef writes up RSS usage recommendations (20 Oct 2009)
  
• TODO: April 2nd, defend my PhD work (01 Mar 2008)
  
• Why chemistry-rich RSS feeds matter... (30 Jan 2008)
  
• Quality of Chemical Database (19 Jun 2007)
  
• Chemistry in HTML: Greasemonkey again (19 Dec 2006)
  
• Including SMILES, CML and InChI in blogs (10 Dec 2006)
  
• Open Text Mining Interface and Bioclipse (07 May 2006)
  
• Blogging chemistry on blogspot.com (18 Feb 2006)
  
• Hot articles; mining the semantic web (15 Feb 2006)
  
• Hot articles; mining the semantic web (15 Feb 2006)
  
• Creating CMLReact from UsefulChem Ugi Reactions (31 Aug 2008)
  
• Opensource Chemistry and Opensource Chemoinformatics (28 Oct 2006)
  
• Chemical reactions in CML (17 Feb 2006)
  
• Chemical reactions in CML (17 Feb 2006)
  
• Curation is an essential part of doing research (29 Jun 2025)
  
• Peer reviewed Chemoinformatics: Why OpenSource Chemoinformatics should be the default (22 Jul 2008)
  
• Jane, find me interesting journals, please. (01 Mar 2008)
  
• TODO: April 2nd, defend my PhD work (01 Mar 2008)
  
• CDK Literature #3 (03 Jan 2008)
  
• BlueObelisk: OpenSource, OpenData and OpenStandards (22 Feb 2006)
  
• Novel QSAR and QSPR descriptors? (24 Feb 2006)
  
• Novel QSAR and QSPR descriptors? (24 Feb 2006)
  
• Novel QSAR and QSPR descriptors? (24 Feb 2006)
  
• Novel QSAR and QSPR descriptors? (24 Feb 2006)
  
• Novel QSAR and QSPR descriptors? (24 Feb 2006)
  
• Open source Jmol taking over the world (25 Feb 2006)
  
• Open source Jmol taking over the world (25 Feb 2006)
  
• Open source in drug discovery (12 Mar 2006)
  
• Uncertainty in NMR based 3D protein models (02 Apr 2006)
  
• Mining the KEGG pathway database with self-organizing maps (04 Apr 2006)
  
• Mining the KEGG pathway database with self-organizing maps (04 Apr 2006)
  
• Peer reviewed Chemoinformatics: Why OpenSource Chemoinformatics should be the default (22 Jul 2008)
  
• CDK Literature #4 (06 Jan 2008)
  
• The molecular QSAR descriptors in the CDK (20 Dec 2007)
  
• When is open source chemoinformatics successful? (07 Nov 2006)
  
• Recent Developments of the Chemistry Development Kit (05 Jun 2006)
  
• Small java applet for 2D structure drawing (18 Aug 2006)
  
• Chemical Archeology: OSCAR3 to NMRShiftDB.org (08 Sep 2006)
  
• Chemical Archeology: OSCAR3 to NMRShiftDB.org (08 Sep 2006)
  
• "Jmol and the CDK add powerful chemical capabilities", says Munos in Nature Reviews Drug Discovery (13 Sep 2006)
  
• Chemo::Blogs #1 (15 Sep 2006)
  
• Chemo::Blogs #1 (15 Sep 2006)
  
• Chemo::Blogs #1 (15 Sep 2006)
  
• Chemo::Blogs #1 (15 Sep 2006)
  
• CDK Bug Squash Party - Day 5 (24 Sep 2006)
  
• Are chemogenomics and proteochemometrics the same? (11 Oct 2006)
  
• Are chemogenomics and proteochemometrics the same? (11 Oct 2006)
  
• When is open source chemoinformatics successful? (07 Nov 2006)
  
• When is open source chemoinformatics successful? (07 Nov 2006)
  
• Niche papers and citation intentions (26 Jan 2025)
  
• CiteULike CiTO Use Case #1: Wordles (31 Oct 2010)
  
• CDK Literature #4 (06 Jan 2008)
  
• A JChemPaint Hack-a-thon (02 Sep 2007)
  
• When is open source chemoinformatics successful? (07 Nov 2006)
  
• Organic chemists can now tune properties without changing the molecular structure?? (12 Nov 2006)
  
• German Conference on Chemoinformatics 2006: Day 3 (14 Nov 2006)
  
• Chemo::Blogs #2 (06 Dec 2006)
  
• Chemo::Blogs #2 (06 Dec 2006)
  
• Chemo::Blogs #2 (06 Dec 2006)
  
• The power of big numbers (06 Dec 2006)
  
• The Molecular Chemometrics Principles #2: be clear in what you mean (12 Aug 2010)
  
• The Molecular Chemometrics Principles #1: access to data (09 Aug 2010)
  
• TODO: April 2nd, defend my PhD work (01 Mar 2008)
  
• Molecular Chemometrics (12 Dec 2006)
  
• Counting constitutional isomers from the molecular formula (17 Dec 2006)
  
• Counting constitutional isomers from the molecular formula (17 Dec 2006)
  
• Modern chemistry in the CDK: beyond the two-atom bond (30 Dec 2006)
  
• Modern chemistry in the CDK: beyond the two-atom bond (30 Dec 2006)
  
• Richard L. Apodaca (08 Dec 2024)
  
• Modern chemistry in the CDK: beyond the two-atom bond (30 Dec 2006)
  
• Modern chemistry in the CDK: beyond the two-atom bond (30 Dec 2006)
  
• Modern chemistry in the CDK: beyond the two-atom bond (30 Dec 2006)
  
• CDK Literature #1 (14 Jan 2007)
  
• CDK Literature #1 (14 Jan 2007)
  
• Quality of Chemical Database (19 Jun 2007)
  
• CDK Workshop - Day #2 (30 Jan 2007)
  
• Fast molecular similarity with a new 3D shape descriptor (08 Mar 2007)
  
• Fast molecular similarity with a new 3D shape descriptor (08 Mar 2007)
  
• CDK Literature #2 (14 Jul 2007)
  
• Pipelining chemical information with Yahoo Pipes (16 Mar 2007)
  
• Adding disclosures to Wikidata with Bioclipse (20 Mar 2016)
  
• Bioclipse-JChemPaint #2 (07 Jul 2009)
  
• Bioclipse for CDK Developers #1 (15 Feb 2009)
  
• Peer reviewed Chemoinformatics: Why OpenSource Chemoinformatics should be the default (22 Jul 2008)
  
• CDK Literature #2 (14 Jul 2007)
  
• CUBIC period is over (06 Apr 2007)
  
• CUBIC period is over (06 Apr 2007)
  
• Clustering web search results (21 Apr 2007)
  
• Numbers are copyrighted? (25 May 2007)
  
• Scientific Literature: searching, ranking, storage (08 Jun 2007)
  
• Preprint servers: the CPS failed, how will Nature Precedings do? (09 Jun 2007)
  
• Preprint servers: the CPS failed, how will Nature Precedings do? (09 Jun 2007)
  
• CDK Literature #3 (03 Jan 2008)
  
• Janocchio: Jmol and CDK based 1H coupling constant prediction (10 Jun 2007)
  
• Quality of Chemical Database (19 Jun 2007)
  
• Quality of Chemical Database (19 Jun 2007)
  
• Standing on the shoulders of ... the Blue Obelisk (06 Jul 2007)
  
• Standing on the shoulders of ... the Blue Obelisk (06 Jul 2007)
  
• CDK Literature #2 (14 Jul 2007)
  
• CDK Literature #2 (14 Jul 2007)
  
• CDK Literature #2 (14 Jul 2007)
  
• The Open Science Notebook 10 years ago (16 Jul 2007)
  
• The Open Science Notebook 10 years ago (16 Jul 2007)
  
• The Open Science Notebook 10 years ago (16 Jul 2007)
  
• Optical Chemical Structure Recognition (31 Jul 2007)
  
• Optical Chemical Structure Recognition (31 Jul 2007)
  
• Optical Chemical Structure Recognition (31 Jul 2007)
  
• Excel messes up your data analysis :) (01 Aug 2007)
  
• JChemPaint too: PNG embedded connectivity tables (24 Aug 2007)
  
• Molecular Connectivity Tables in Images (11 Aug 2007)
  
• Centralized or decentralized? (13 Aug 2007)
  
• Dapagliflozin: the molecular structure (22 Aug 2007)
  
• Automatic Classification of thousands of Crystal Structures (24 Aug 2007)
  
• Automatic Classification of thousands of Crystal Structures (24 Aug 2007)
  
• TODO: April 2nd, defend my PhD work (01 Mar 2008)
  
• Automatic Classification of thousands of Crystal Structures (24 Aug 2007)
  
• Automatic Classification of thousands of Crystal Structures (24 Aug 2007)
  
• Richard L. Apodaca (08 Dec 2024)
  
• JChemPaint too: PNG embedded connectivity tables (24 Aug 2007)
  
• Double-charging your readers: quite unacceptable indeed (07 Sep 2007)
  
• Outscoring old science (13 Sep 2007)
  
• Why plain QSAR is not enough for me... (16 Sep 2007)
  
• Tagging Molecules: a mashup of Connotea and RDF (19 Sep 2007)
  
• re: ACS RSS feeds are messed up (21 Sep 2007)
  
• Taverna Workshop, Day 1 Update (08 Oct 2007)
  
• CompLife2007, Utrecht/NL. Day 1 and 2 (14 Oct 2007)
  
• Using the Nintendo Wii for serious science... (09 Nov 2007)
  
• Be in my Advisory Board #1: being a good Open Science citizen (27 Nov 2007)
  
• Using the Nintendo Wii for serious science... (09 Nov 2007)
  
• MetWare: metabolomics database project started on SourceForge (22 Nov 2007)
  
• MetWare: metabolomics database project started on SourceForge (22 Nov 2007)
  
• MetWare: metabolomics database project started on SourceForge (22 Nov 2007)
  
• Web2O, Open Chemistry, and Chemblaics (03 Dec 2007)
  
• Open Lab 2007 results (02 Jan 2008)
  
• My Open Laboratory 2007 submissions (04 Dec 2007)
  
• Blog planets: blogging about Debian, GNOME, Wikimedia, FSFE, and many more (04 Aug 2023)
  
• Programming in the Life Sciences #4: communication from within HTML (09 Oct 2013)
  
• My Google Scholar Citations profile arrived (02 Aug 2011)
  
• New FriendFeed layout, but there is a fix... (30 Apr 2009)
  
• Journal of Cheminformatics: I hope the Instructions to the Authors improve (22 Mar 2009)
  
• MetWare screenshot: propagating XML Schema data types (26 Aug 2008)
  
• Legal Advice Needed: the NIH restricting access to our CC-licensed research results (07 Apr 2008)
  
• Christmas presents... (21 Dec 2007)
  
• CDK Literature #3 (03 Jan 2008)
  
• CDK Literature #3 (03 Jan 2008)
  
• CDK Literature #3 (03 Jan 2008)
  
• CDK Literature #3 (03 Jan 2008)
  
• CDK Literature #4 (06 Jan 2008)
  
• CDK Literature #4 (06 Jan 2008)
  
• CDK Literature #4 (06 Jan 2008)
  
• Java Server Pages with CDK functionality (20 Jan 2008)
  
• Performance: C, C++, C#, Java, Perl and Python (05 Feb 2008)
  
• Jane, find me interesting journals, please. (01 Mar 2008)
  
• The Chemical Object Identifier; or, the freedom to identify chemicals (09 Mar 2008)
  
• The Chemical Object Identifier; or, the freedom to identify chemicals (09 Mar 2008)
  
• The CDK/Metabolomics/Chemometrics Unconference results (07 Apr 2008)
  
• Open Access / Open Data leads to added value (21 Apr 2008)
  
• Quality Publishing: EndNote versus InChIs (22 Apr 2008)
  
• Comments on 'Rethinking software access' (27 Apr 2008)
  
• Re: What should a Nature Chemistry paper look like? (08 May 2008)
  
• Metware Status Report (16 May 2008)
  
• CDK Literature #5 (26 Jul 2008)
  
• CDK Literature #5 (26 Jul 2008)
  
• CDK Literature #5 (26 Jul 2008)
  
• CDK Literature #5 (26 Jul 2008)
  
• CDK Literature #5 (26 Jul 2008)
  
• pKa prediction, or, how to convert a JCIM paper into Java (06 Oct 2008)
  
• EMBRACE workshop in Uppsala (03 Nov 2008)
  
• Who says Java is not fast?!? (04 Dec 2008)
  
• Cheminformatics Benchmark Project #1 (05 Dec 2008)
  
• RSC now allows Jmol in main text of publication... well, almost (19 Jan 2009)
  
• MetWare presentation at Metabolomics Workshop (27 Jan 2009)
  
• RDF for chemistry (25 Feb 2009)
  
• Nature Chemistry improves publishing chemistry: a detailed analysis (19 Mar 2009)
  
• Preferential positions of phophate counter ions (20 Mar 2009)
  
• Preferential positions of phophate counter ions (20 Mar 2009)
  
• Journal of Cheminformatics: I hope the Instructions to the Authors improve (22 Mar 2009)
  
• Journal of Cheminformatics: I hope the Instructions to the Authors improve (22 Mar 2009)
  
• The Dr Who's of Life Sciences (21 Jun 2009)
  
• Knowledge Management - Ontologies (07 Jul 2009)
  
• PLoS ONE and Chemical blogspace: About no Impact yet (22 Aug 2009)
  
• Open Knowledge: Reproducibility in Cheminformatics with ODOSOS (02 Sep 2009)
  
• NMRShiftDB RDF #2: Some statistics (05 Sep 2009)
  
• ChemPedia RDF #1: the SPARQL end point (19 Nov 2009)
  
• SWAT4LS: "Linking Open Drug Data to Cheminformatics and Proteochemometrics" (21 Nov 2009)
  
• December wrap up. X-mas holidays at last! (19 Dec 2009)
  
• cdk2024 #1: NWO Open Science grant for the Chemistry Development Kit (07 Apr 2024)
  
• Oxford... #2 (06 Aug 2010)
  
• Working on Oscar for three months (15 Oct 2010)
  
• Niche papers and citation intentions (26 Jan 2025)
  
• New Paper: "The ChEMBL database as linked open data" (09 May 2013)
  
• ChEMBL 13 as RDF (04 Mar 2012)
  
• CiTO / CiteULike: publishing innovation (23 Feb 2012)
  
• CiteULike CiTO Use Case #1: Wordles (31 Oct 2010)
  
• ChemWriter, Google Chrome, and Many Eyes in Open Source (03 Dec 2010)
  
• Status update on BJOC analysis with Oscar and ChemicalTagger #3 (23 Dec 2010)
  
• Oscar: training data, models, etc (26 Dec 2010)
  
• Text mining chemistry from Dutch or Swedish texts (30 Dec 2010)
  
• Text mining chemistry from Dutch or Swedish texts (30 Dec 2010)
  
• Text mining chemistry from Dutch or Swedish texts (30 Dec 2010)
  
• Oscar4 paper: text mining in Bioclipse (and everywhere else, of course) (01 Nov 2011)
  
• Migrating pKa data from DrugMet to Wikidata (27 Mar 2016)
  
• New Paper: "The ChEMBL database as linked open data" (09 May 2013)
  
• ChEMBL 13 as RDF (04 Mar 2012)
  
• ChEMBL 13 as RDF (04 Mar 2012)
  
• "Emerging practices for mapping and linking life sciences data using RDF" (10 Apr 2012)
  
• CiteULike adds a HTML widget to embed citations (06 Feb 2013)
  
• Additional files, data, datasets, databases, and published data (29 Oct 2024)
  
• New Paper: "The ChEMBL database as linked open data" (09 May 2013)
  
• New Paper: "The ChEMBL database as linked open data" (09 May 2013)
  
• Programming in the Life Sciences #23: research output for the future (04 Nov 2018)
  
• Programming in the Life Sciences #8: coding standards (29 Oct 2013)
  
• Programming in the Life Sciences #23: research output for the future (04 Nov 2018)
  
• Programming in the Life Sciences #8: coding standards (29 Oct 2013)
  
• Programming in the Life Sciences #9: APIs and Web Services (30 Oct 2013)
  
• Programming in the Life Sciences #12: First screenshots (06 Dec 2013)
  
• Elsevier's new text mining initiative is a step sideways (15 Feb 2014)
  
• Slow publishing innovation: SMILES in ACS journals (21 Feb 2014)
  
• Jean-Claude Bradley, Blue Obelisk award winner (14 May 2014)
  
• Jean-Claude Bradley, Blue Obelisk award winner (14 May 2014)
  
• Programming in the Life Sciences #17: The Open PHACTS scientific questions (06 Nov 2014)
  
• Getting CAS registry numbers out of WikiData (10 Apr 2015)
  
• Getting CAS registry numbers out of WikiData (10 Apr 2015)
  
• Getting CAS registry numbers out of WikiData (10 Apr 2015)
  
• PubChemRDF: semantic web access to PubChem data (15 Jul 2015)
  
• PlantMetWiki: a linked open data service for querying and analyzing plant pathway knowledge (05 Jan 2026)
  
• BridgeDb NWO grant update #1: first steps (05 Mar 2022)
  
• Downloading all currently released BridgeDb identifier mapping databases (16 Feb 2021)
  
• Coding an OWL ontology in HTML5 and RDFa (27 Sep 2015)
  
• New Edition! Getting CAS registry numbers out of WikiData (22 Dec 2015)
  
• Adding chemical compounds to Wikidata (27 Jan 2016)
  
• Migrating pKa data from DrugMet to Wikidata (27 Mar 2016)
  
• Adding disclosures to Wikidata with Bioclipse (20 Mar 2016)
  
• Migrating pKa data from DrugMet to Wikidata (27 Mar 2016)
  
• Migrating pKa data from DrugMet to Wikidata (27 Mar 2016)
  
• Migrating pKa data from DrugMet to Wikidata (27 Mar 2016)
  
• New Paper: "Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources" (25 Jun 2016)
  
• Niche papers and citation intentions (26 Jan 2025)
  
• New Paper: "Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources" (25 Jun 2016)
  
• New Paper: "Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources" (25 Jun 2016)
  
• Where do the WikiPathways come from? (22 Feb 2026)
  
• New Paper: "Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources" (25 Jun 2016)
  
• Two Apache Jena SPARQL query performance observations (02 Jul 2016)
  
• The SWAT4LS poster about eNanoMapper (18 Dec 2016)
  
• Two conference proceedings: nanopublications and Scholia (15 Oct 2017)
  
• Two conference proceedings: nanopublications and Scholia (15 Oct 2017)
  
• New paper: "Integration among databases and data sets to support productive nanotechnology: Challenges and recommendations" (15 Dec 2017)
  
• New paper: "Integration among databases and data sets to support productive nanotechnology: Challenges and recommendations" (15 Dec 2017)
  
• New paper: "Integration among databases and data sets to support productive nanotechnology: Challenges and recommendations" (15 Dec 2017)
  
• New paper: "Integration among databases and data sets to support productive nanotechnology: Challenges and recommendations" (15 Dec 2017)
  
• new paper: "Wikidata as a knowledge graph for the life sciences" (19 Mar 2020)
  
• Compound (class) identifiers in Wikidata (18 Aug 2018)
  
• Compound (class) identifiers in Wikidata (18 Aug 2018)
  
• Compound (class) identifiers in Wikidata (18 Aug 2018)
  
• Compound (class) identifiers in Wikidata (18 Aug 2018)
  
• Data Curation: 5% inspiration, 95% frustration (cleaning up data inconsistencies) (16 Sep 2018)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• New paper: From papers to RDF-based integration of physicochemical data and adverse outcome pathways for nanomaterials (20 May 2024)
  
• Data Curation: 5% inspiration, 95% frustration (cleaning up data inconsistencies) (16 Sep 2018)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• Qeios, an open dissemination platform for research output (02 Jul 2023)
  
• Data Curation: 5% inspiration, 95% frustration (cleaning up data inconsistencies) (16 Sep 2018)
  
• Two presentations at WikiPathways 2018 Summit #WP18Summit (11 Oct 2018)
  
• Two presentations at WikiPathways 2018 Summit #WP18Summit (11 Oct 2018)
  
• Programming in the Life Sciences #23: research output for the future (04 Nov 2018)
  
• Programming in the Life Sciences #23: research output for the future (04 Nov 2018)
  
• Programming in the Life Sciences #23: research output for the future (04 Nov 2018)
  
• Creating nanopublications with Groovy (27 Dec 2018)
  
• Creating nanopublications with Groovy (27 Dec 2018)
  
• Open Science Retreat #2: CiTO Nanopublications (02 Apr 2024)
  
• What metabolites are found in which species? Nanopublications from Wikidata (30 Mar 2019)
  
• Biology, ACPs, lipids, cheminformatics, and Dagstuhl (01 Aug 2022)
  
• new paper: "Wikidata as a knowledge graph for the life sciences" (19 Mar 2020)
  
• Serious Request: "WikiPathways in actie voor MetaKids" (09 Dec 2024)
  
• SARS-CoV-2, COVID-19, and Open Science (31 Oct 2020)
  
• SARS-CoV-2, COVID-19, and Open Science (31 Oct 2020)
  
• SARS-CoV-2, COVID-19, and Open Science (31 Oct 2020)
  
• SARS-CoV-2, COVID-19, and Open Science (31 Oct 2020)
  
• Better Publishing (16 Sep 2024)
  
• CiTO updates #1: first research paper in the Journal of Cheminformatics with CiTO annotation published (01 Nov 2020)
  
• CiTO updates #1: first research paper in the Journal of Cheminformatics with CiTO annotation published (01 Nov 2020)
  
• new paper: "WikiPathways: connecting communities" (28 Nov 2020)
  
• CiTO updates #3: third paper in the collection and updated Scholia patch (30 Nov 2020)
  
• Downloading all currently released BridgeDb identifier mapping databases (16 Feb 2021)
  
• Better Publishing (16 Sep 2024)
  
• Conflict of Interest. Or why I am stepping down as Editor-in-Chief of the Journal of Cheminformatics. (11 Jun 2021)
  
• Scholarly journals should use "Archived on" instead of "Accessed on" (28 Aug 2021)
  
• Scholarly journals should use "Archived on" instead of "Accessed on" (28 Aug 2021)
  
• Scholarly journals should use "Archived on" instead of "Accessed on" (28 Aug 2021)
  
• Scholarly journals should use "Archived on" instead of "Accessed on" (28 Aug 2021)
  
• Scholarly journals should use "Archived on" instead of "Accessed on" (28 Aug 2021)
  
• Scholarly journals should use "Archived on" instead of "Accessed on" (28 Aug 2021)
  
• Scholarly journals should use "Archived on" instead of "Accessed on" (28 Aug 2021)
  
• BioHackathon Europe 2021 #1: CiTO annotations in BioHackrXiv (15 Nov 2021)
  
• BridgeDb NWO grant update #2: building up momentum (17 Apr 2022)
  
• BridgeDb NWO grant update #2: building up momentum (17 Apr 2022)
  
• Blog updates (19 Jan 2025)
  
• BridgeDb NWO grant update #2: building up momentum (17 Apr 2022)
  
• New paper: From papers to RDF-based integration of physicochemical data and adverse outcome pathways for nanomaterials (20 May 2024)
  
• new: "Providing Adverse Outcome Pathways from the AOP-Wiki in a Semantic Web Format to Increase Usability and Accessibility of the Content" (17 May 2022)
  
• new: "Providing Adverse Outcome Pathways from the AOP-Wiki in a Semantic Web Format to Increase Usability and Accessibility of the Content" (17 May 2022)
  
• new: "CAS Common Chemistry in 2021: Expanding Access to Trusted Chemical Information for the Scientific Community" (22 May 2022)
  
• Biology, ACPs, lipids, cheminformatics, and Dagstuhl (01 Aug 2022)
  
• Biology, ACPs, lipids, cheminformatics, and Dagstuhl (01 Aug 2022)
  
• s/Twitter/Mastodon/g (12 Nov 2022)
  
• Scholia timeline (27 Jan 2023)
  
• CiTO updates #4: annotations in datasets (02 Apr 2023)
  
• CiTO updates #4: annotations in datasets (02 Apr 2023)
  
• cdk2024 #4: Chemistry Development Kit User Group Meeting - Day 1 (11 Mar 2025)
  
• CiTO updates #4: annotations in datasets (02 Apr 2023)
  
• CiTO updates #4: annotations in datasets (02 Apr 2023)
  
• CiTO updates #4: annotations in datasets (02 Apr 2023)
  
• CiTO updates #4: annotations in datasets (02 Apr 2023)
  
• CiTO updates #4: annotations in datasets (02 Apr 2023)
  
• CiTO updates #4: annotations in datasets (02 Apr 2023)
  
• CiTO updates #4: annotations in datasets (02 Apr 2023)
  
• CiTO updates #4: annotations in datasets (02 Apr 2023)
  
• Paper: The FAIR Cookbook - the essential resource for and by FAIR doers (22 May 2023)
  
• Community activity #2: FAIRsharing (11 Jun 2023)
  
• Community activity #2: FAIRsharing (11 Jun 2023)
  
• Journal Rankings (06 Jul 2023)
  
• Community activity #2: FAIRsharing (11 Jun 2023)
  
• Qeios, an open dissemination platform for research output (02 Jul 2023)
  
• Qeios, an open dissemination platform for research output (02 Jul 2023)
  
• Qeios, an open dissemination platform for research output (02 Jul 2023)
  
• Qeios, an open dissemination platform for research output (02 Jul 2023)
  
• Qeios, an open dissemination platform for research output (02 Jul 2023)
  
• Qeios, an open dissemination platform for research output (02 Jul 2023)
  
• SPARQL examples: SIB model, software, and patches (17 Nov 2024)
  
• Qeios, an open dissemination platform for research output (02 Jul 2023)
  
• Qeios, an open dissemination platform for research output (02 Jul 2023)
  
• History, provenance, detail (08 Aug 2023)
  
• Last post there / the Freebie model online (18 Aug 2023)
  
• American Chemical Society Fall 2023 meeting (09 Sep 2023)
  
• New paper: FAIR assessment of nanosafety data reusability with community standards (10 Jun 2024)
  
• Using FAIR to select data for reuse (17 Sep 2023)
  
• Using FAIR to select data for reuse (17 Sep 2023)
  
• Using FAIR to select data for reuse (17 Sep 2023)
  
• Artificial intelligence for natural product drug discovery (24 Sep 2023)
  
• Artificial intelligence for natural product drug discovery (24 Sep 2023)
  
• Where does the WikiPathways Cited In information come from? (10 Jan 2026)
  
• Retracted articles in Wikidata (16 Feb 2025)
  
• CiTO updates: Wakefield and WikiPathways (07 Aug 2024)
  
• New paper: "WikiPathways 2024: next generation pathway database" (11 Nov 2023)
  
• New paper: "Wikidata subsetting: approaches, tools, and evaluation" (13 Feb 2024)
  
• Rescuing Scholia #3: We did it! (28 Feb 2026)
  
• New paper: "Wikidata subsetting: approaches, tools, and evaluation" (13 Feb 2024)
  
• Reusing data: two new papers (17 Mar 2024)
  
• Reusing data: two new papers (17 Mar 2024)
  
• Reusing data: two new papers (17 Mar 2024)
  
• Open Science Retreat #2: CiTO Nanopublications (02 Apr 2024)
  
• Where does the WikiPathways Cited In information come from? (10 Jan 2026)
  
• Open Science Retreat #2: CiTO Nanopublications (02 Apr 2024)
  
• cdk2024 #1: NWO Open Science grant for the Chemistry Development Kit (07 Apr 2024)
  
• cdk2024 #2: publishing grant proposals (18 May 2024)
  
• New paper: From papers to RDF-based integration of physicochemical data and adverse outcome pathways for nanomaterials (20 May 2024)
  
• New paper: From papers to RDF-based integration of physicochemical data and adverse outcome pathways for nanomaterials (20 May 2024)
  
• New paper: From papers to RDF-based integration of physicochemical data and adverse outcome pathways for nanomaterials (20 May 2024)
  
• New paper: From papers to RDF-based integration of physicochemical data and adverse outcome pathways for nanomaterials (20 May 2024)
  
• New paper: From papers to RDF-based integration of physicochemical data and adverse outcome pathways for nanomaterials (20 May 2024)
  
• New paper: A template wizard for the cocreation of machine-readable data-reporting to harmonize the evaluation of (nano)materials (27 May 2024)
  
• New paper: FAIR assessment of nanosafety data reusability with community standards (10 Jun 2024)
  
• New paper: A template wizard for the cocreation of machine-readable data-reporting to harmonize the evaluation of (nano)materials (27 May 2024)
  
• New paper: FAIR assessment of nanosafety data reusability with community standards (10 Jun 2024)
  
• Two meetings: ELIXIR Toxicology and FAIR4ChemNL (10 Jun 2024)
  
• Two meetings: ELIXIR Toxicology and FAIR4ChemNL (10 Jun 2024)
  
• Two meetings: ELIXIR Toxicology and FAIR4ChemNL (10 Jun 2024)
  
• cdk2024 #3: an unexpected downstream project (16 Jun 2024)
  
• GoatCounter, Rogue Scholar and more new things (21 Jul 2024)
  
• GoatCounter, Rogue Scholar and more new things (21 Jul 2024)
  
• GoatCounter, Rogue Scholar and more new things (21 Jul 2024)
  
• GoatCounter, Rogue Scholar and more new things (21 Jul 2024)
  
• GoatCounter, Rogue Scholar and more new things (21 Jul 2024)
  
• GoatCounter, Rogue Scholar and more new things (21 Jul 2024)
  
• GoatCounter, Rogue Scholar and more new things (21 Jul 2024)
  
• GoatCounter, Rogue Scholar and more new things (21 Jul 2024)
  
• New paper: "Discovering life's directed metabolic (sub)paths to interpret human biochemical markers using the DSMN tool" (31 Jul 2024)
  
• CiTO updates: Wakefield and WikiPathways (07 Aug 2024)
  
• CiTO updates: Wakefield and WikiPathways (07 Aug 2024)
  
• Retracted articles cited in Wikipedia (08 Jun 2025)
  
• Scholia configurability (23 Aug 2024)
  
• Scholarly discussions through the eyes of CiTO (and Wikidata) (11 Aug 2024)
  
• CiTO updates: Wakefield and WikiPathways (07 Aug 2024)
  
• CiTO updates: Wakefield and WikiPathways (07 Aug 2024)
  
• CiTO updates: Wakefield and WikiPathways (07 Aug 2024)
  
• Scholarly discussions through the eyes of CiTO (and Wikidata) (11 Aug 2024)
  
• Scholarly discussions through the eyes of CiTO (and Wikidata) (11 Aug 2024)
  
• Scholarly discussions through the eyes of CiTO (and Wikidata) (11 Aug 2024)
  
• Adding citations between existing articles in Wikidata (07 Sep 2024)
  
• Better Publishing (16 Sep 2024)
  
• NASA Transform to Open Science (TOPS) Open Science 101 (21 Oct 2024)
  
• New paper: The Virtual Human Platform for Safety Assessment (VHP4Safety) (24 Oct 2024)
  
• Additional files, data, datasets, databases, and published data (29 Oct 2024)
  
• Additional files, data, datasets, databases, and published data (29 Oct 2024)
  
• Additional files, data, datasets, databases, and published data (29 Oct 2024)
  
• Additional files, data, datasets, databases, and published data (29 Oct 2024)
  
• Additional files, data, datasets, databases, and published data (29 Oct 2024)
  
• Additional files, data, datasets, databases, and published data (29 Oct 2024)
  
• Additional files, data, datasets, databases, and published data (29 Oct 2024)
  
• SPARQL examples: SIB model, software, and patches (17 Nov 2024)
  
• Version of record, and what Open Access must learn from Open Science (23 Nov 2024)
  
• Richard L. Apodaca (08 Dec 2024)
  
• Richard L. Apodaca (08 Dec 2024)
  
• Richard L. Apodaca (08 Dec 2024)
  
• Richard L. Apodaca (08 Dec 2024)
  
• Richard L. Apodaca (08 Dec 2024)
  
• Richard L. Apodaca (08 Dec 2024)
  
• Richard L. Apodaca (08 Dec 2024)
  
• Richard L. Apodaca (08 Dec 2024)
  
• Serious Request: "WikiPathways in actie voor MetaKids" (09 Dec 2024)
  
• Where do the WikiPathways come from? (22 Feb 2026)
  
• Serious Request: the results (05 Jan 2025)
  
• Serious Request: "WikiPathways in actie voor MetaKids" (09 Dec 2024)
  
• FAIR blog-to-blog citations (30 Dec 2024)
  
• FAIR blog-to-blog citations (30 Dec 2024)
  
• Blog updates (19 Jan 2025)
  
• FAIR blog-to-blog citations (30 Dec 2024)
  
• ISAAC Chrome Extension (04 Jan 2025)
  
• ISAAC Chrome Extension (04 Jan 2025)
  
• ISAAC Chrome Extension (04 Jan 2025)
  
• Serious Request: the results (05 Jan 2025)
  
• Serious Request: the results (05 Jan 2025)
  
• Serious Request: the results (05 Jan 2025)
  
• Blog updates (19 Jan 2025)
  
• Blog updates (19 Jan 2025)
  
• Niche papers and citation intentions (26 Jan 2025)
  
• Niche papers and citation intentions (26 Jan 2025)
  
• Niche papers and citation intentions (26 Jan 2025)
  
• Niche papers and citation intentions (26 Jan 2025)
  
• Niche papers and citation intentions (26 Jan 2025)
  
• Niche papers and citation intentions (26 Jan 2025)
  
• CiTO for blog citations (08 Feb 2025)
  
• Beilstein journals contain Bioschemas (13 Feb 2025)
  
• Beilstein journals contain Bioschemas (13 Feb 2025)
  
• Beilstein journals contain Bioschemas (13 Feb 2025)
  
• Beilstein journals contain Bioschemas (13 Feb 2025)
  
• Beilstein journals contain Bioschemas (13 Feb 2025)
  
• Beilstein journals contain Bioschemas (13 Feb 2025)
  
• Retracted articles in Wikidata (16 Feb 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• One Million IUPAC names (08 Mar 2025)
  
• cdk2024 #4: Chemistry Development Kit User Group Meeting - Day 1 (11 Mar 2025)
  
• cdk2024 #4: Chemistry Development Kit User Group Meeting - Day 1 (11 Mar 2025)
  
• cdk2024 #4: Chemistry Development Kit User Group Meeting - Day 1 (11 Mar 2025)
  
• New preprint: "BioHackEU24 report: ORCID and ROR identifiers in BioHackrXiv reports" (23 Mar 2025)
  
• cdk2024 #6: wrapping up already (30 Mar 2025)
  
• One Million IUPAC names #2: the 100 thousand milestone (27 Apr 2025)
  
• One Million IUPAC names #2: the 100 thousand milestone (27 Apr 2025)
  
• INTOXICOM Workshop #4: Training Materials for Toxicology (12 May 2025)
  
• INTOXICOM Workshop #4: Training Materials for Toxicology (12 May 2025)
  
• New preprint: "Scholia Chemistry: access to chemistry in Wikidata" (25 May 2025)
  
• PFAS in the blood of the Dutch population (06 Jul 2025)
  
• New preprint: "Scholia Chemistry: access to chemistry in Wikidata" (25 May 2025)
  
• ICCS2025: back in Noordwijkerhout (08 Jun 2025)
  
• ICCS2025: back in Noordwijkerhout (08 Jun 2025)
  
• ICCS2025: back in Noordwijkerhout (08 Jun 2025)
  
• ICCS2025: back in Noordwijkerhout (08 Jun 2025)
  
• One Million IUPAC names #3: the 200 thousand milestone and 1 million IUPAC names (09 Jun 2025)
  
• Curation is an essential part of doing research (29 Jun 2025)
  
• PFAS in the blood of the Dutch population (06 Jul 2025)
  
• Archiving, but not really (06 Aug 2025)
  
• Archiving, but not really (06 Aug 2025)
  
• Archiving, but not really (06 Aug 2025)
  
• Archiving, but not really (06 Aug 2025)
  
• One Million IUPAC names #4: a lot is happening (09 Aug 2025)
  
• One Million IUPAC names #4: a lot is happening (09 Aug 2025)
  
• The Internet Journal of Chemistry (11 Aug 2025)
  
• The Internet Journal of Chemistry (11 Aug 2025)
  
• Integrating comments via the Fediverse (13 Aug 2025)
  
• AI Technologies in Academia (18 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• The eNanoMapper project deliverables (24 Aug 2025)
  
• Open Infrastructures #1: Research Software Directory (29 Dec 2025)
  
• Open Infrastructures #1: Research Software Directory (29 Dec 2025)
  
• PlantMetWiki: a linked open data service for querying and analyzing plant pathway knowledge (05 Jan 2026)
  
• PlantMetWiki: a linked open data service for querying and analyzing plant pathway knowledge (05 Jan 2026)
  
• PlantMetWiki: a linked open data service for querying and analyzing plant pathway knowledge (05 Jan 2026)
  
• Where does the WikiPathways Cited In information come from? (10 Jan 2026)
  
• Where does the WikiPathways Cited In information come from? (10 Jan 2026)
  
• Chemical blogs history (17 Jan 2026)
  
• Chemical blogs history (17 Jan 2026)
  
• Chemical blogs history (17 Jan 2026)
  
• Chemical blogs history (17 Jan 2026)
  
• Chemical blogs history (17 Jan 2026)
  
• The TDCC NES Col-Lab Retreat (21 Feb 2026)
  
• The TDCC NES Col-Lab Retreat (21 Feb 2026)
  
• Where do the WikiPathways come from? (22 Feb 2026)
  
• Where do the WikiPathways come from? (22 Feb 2026)
  
• Where do the WikiPathways come from? (22 Feb 2026)
  
• Where do the WikiPathways come from? (22 Feb 2026)
  
• Where do the WikiPathways come from? (22 Feb 2026)
  
• Where do the WikiPathways come from? (22 Feb 2026)
  
• CDK 2.12 (08 Mar 2026)
  
• Using compact identifiers in project reports (29 Mar 2026)
  
• Using compact identifiers in project reports (29 Mar 2026)
  
• Using compact identifiers in project reports (29 Mar 2026)
  
• Using compact identifiers in project reports (29 Mar 2026)
  
• Using compact identifiers in project reports (29 Mar 2026)
  
• Using compact identifiers in project reports (29 Mar 2026)
  
• Using compact identifiers in project reports (29 Mar 2026)
  
• SWAT4HCLS 2026 (04 Apr 2026)
  
• SWAT4HCLS 2026 (04 Apr 2026)