• Going to the German Chemoinformatics Conference

    This sunday starts the first German Chemoinformatics Conference in Goslar. It’s an interesting programme , with presentations on the InChI, PubChem, 25 years of chemoinformatics, the chemical semantic web, and much more.
  • Scons and bksys for kfile_chemical

    Not so long ago, it was decided that KDE 4.0 will use SCons as a configuration and building tool, instead of the autotools and make: the common ./configure && make && make install which has served the open source community very well for so long.
  • When to stop including QSAR model variables...

    Yesterday I reviewed an article which published a QSPR model which looked something like:
  • A R GUI: rkward

    The great thing about open source is that… it’s open.
  • Ubuntu Dapper will include chemistry features

    I just read that the Kubuntu team wants to include Kat in the dapper release (scheduled for April 2006). Kat is (to be) the KDE equivalent of Google’s desktop search bar.
  • R/CDK install fails on GCC 4.0 systems

    Some time ago Rajarshi Guha introduced R bindings for the CDK (see his CDK News articles), and today I tried to install his rcdk package that makes it happen.
  • Open Source data mining in chemoinformatics

    On the 7th International Conference on Chemical Structures Jeroen Kazius has a poster on finding discriminative substructures, that is, molecular fragments which can be discriminate between two acitivity classes. The software is released as Gaston, is written in C++ and has the GPL license.