Tag: Bioclipse

  bioclipse 

Blog posts

• Adding citations between existing articles in Wikidata (07 Sep 2024)
  
• new: "CAS Common Chemistry in 2021: Expanding Access to Trusted Chemical Information for the Scientific Community" (22 May 2022)
  
• Bioclipse git experiences #2: Create patches for individual plugins/features (03 Jul 2020)
  
• Bioclipse git experiences #1: Strip away unwanted plugins (02 Jul 2020)
  
• Adding disclosures to Wikidata with Bioclipse (20 Mar 2016)
  
• Adding chemical compounds to Wikidata (27 Jan 2016)
  
• Oscar4 paper: text mining in Bioclipse (and everywhere else, of course) (01 Nov 2011)
  
• Bioclipse-Oscar4 - Text mining in Bioclipse (27 Sep 2011)
  
• Bioclipse and SPARQL end points #2: MyExperiment (21 Aug 2009)
  
• Bioclipse and SPARQL end points (16 Aug 2009)
  
• Bioclipse-JChemPaint (18 Jun 2009)
  
• Bioclipse for CDK Developers #1 (15 Feb 2009)
  
• Statistics on the Development Community (23 Jan 2009)
  
• Bioclipse and Gist integration (16 Jan 2009)
  
• Editing and Validation of PubChem XML documents (15 Jan 2009)
  
• Editing and Validation of CML documents in Bioclipse (30 Dec 2008)
  
• Solubility Data in Bioclipse #1 (18 Nov 2008)
  
• Open{Data|Source|Standards} is not enough: we need Open Projects (07 Nov 2008)
  
• Next generation asynchronous webservices #2 (04 Nov 2008)
  
• EMBRACE workshop in Uppsala (03 Nov 2008)
  
• Next generation asynchronous webservices (31 Oct 2008)
  
• Bioclipse2 Scripting #1: from SMILES to a UFF optimized structure in Jmol (25 Oct 2008)
  
• Bugzilla Eclipse IDE integration: Mylyn (20 Oct 2008)
  
• Jmol 11.6 RC 18 in Bioclipse (07 Oct 2008)
  
• Moved to Sweden: Post-doc in the Bioclipse group of Prof. Jarl Wikberg (24 Sep 2008)
  
• UgiChem2CML (31 Aug 2008)
  
• SVN commit hooks down for CDK and Bioclipse (05 Jul 2008)
  
• The SWT JChemPaint (viewing) widget (18 Jun 2008)
  
• Development of the new JChemPaint (19 May 2008)
  
• MetWare, SKOS and Java Server Faces (30 Apr 2008)
  
• JChemPaint for Bioclipse2 (28 Apr 2008)
  
• Be in my Advisory Board #3: JChemPaint widgets? (22 Mar 2008)
  
• Metabolomics Ontologies: SKOS-ified the ArMet specification (03 Mar 2008)
  
• Collaborative work with Bioclipse (02 Jan 2008)
  
• Christmas presents... (21 Dec 2007)
  
• The molecular QSAR descriptors in the CDK (20 Dec 2007)
  
• Open Source, Open Data at the European Bioinformatics Institute (07 Dec 2007)
  
• Glueing BioMoby services together with JavaScript in Bioclipse (05 Nov 2007)
  
• More QSAR in Bioclipse: the JOELib extension (18 Oct 2007)
  
• Taverna Workshop, Day 1 Update (08 Oct 2007)
  
• CompLife2007, Utrecht/NL; Taverna, EBI/Hinxton/UK (30 Sep 2007)
  
• Tuning Google Results? (21 Sep 2007)
  
• SWT View with the new JChemPaint (20 Sep 2007)
  
• Further Bioclipse QSAR functionality development (26 Jul 2007)
  
• QSAR plugin for Bioclipse getting in shape (27 Jun 2007)
  
• Payed summer jobs in chemoinformatics (16 Jun 2007)
  
• CUBIC period is over (06 Apr 2007)
  
• German Conference on Chemoinformatics 2006: Day 1 and 2 (13 Nov 2006)
  
• Bioclipse Workshop: short but productive (03 Nov 2006)
  
• The Bioclipse Workshop is in progress (01 Nov 2006)
  
• CompLife'06 - Day 1 (28 Sep 2006)
  
• Complex PDB documents using the Bioclipse ChildResourceCreator (14 Sep 2006)
  
• Chemical Archeology: OSCAR3 to NMRShiftDB.org (08 Sep 2006)
  
• Bioclipse gets a new extension point (22 Aug 2006)
  
• Context help in Bioclipse (13 Jul 2006)
  
• Matrix support in Bioclipse (11 Jul 2006)
  
• AVI movies of CMLRSS howto in Bioclipse (03 Jul 2006)
  
• Text mining for chemistry using OSCAR3 (22 Jun 2006)
  
• Dutch Summer of Code sponsors a Bioclipse project (20 Jun 2006)
  
• Blue Obelisk in Obernai at Chemoinformatics in Europe (28 May 2006)
  
• XML validation on Eclipse with Web Tools Platform (24 May 2006)
  
• A live life-sciences CD (22 May 2006)
  
• Open Text Mining Interface and Bioclipse (07 May 2006)
  
• Protein support in Bioclipse using Jmol and the CDK (23 Apr 2006)
  
• Getting Jmol's 'cartoon on' to work in Bioclipse (10 Apr 2006)
  
• The Cologne University BioInformatics Center (CUBIC) (25 Mar 2006)
  
• Progress with CMLRSS plugin for Bioclipse (06 Mar 2006)
  
• BlueObelisk: OpenSource, OpenData and OpenStandards (22 Feb 2006)
  
• About JChemPaint's future and todays 2.1.5 release (03 Dec 2005)
  
• Getting Started with Eclipse and the SWT (30 Nov 2005)
  
• Bioclipse: the chemo-/bioinformatics workbench (21 Nov 2005)