<?xml version="1.0" encoding="utf-8"?><feed xmlns="http://www.w3.org/2005/Atom" ><generator uri="https://jekyllrb.com/" version="4.3.4">Jekyll</generator><link href="https://chem-bla-ics.linkedchemistry.info/feed/by_tag/ugi.xml" rel="self" type="application/atom+xml" /><link href="https://chem-bla-ics.linkedchemistry.info/" rel="alternate" type="text/html" /><updated>2026-06-15T12:00:19+00:00</updated><id>https://chem-bla-ics.linkedchemistry.info/feed/by_tag/ugi.xml</id><title type="html">chem-bla-ics</title><subtitle>Chemblaics (pronounced chem-bla-ics) is the science that uses open science and computers to solve problems in chemistry, biochemistry and related fields.</subtitle><author><name>Egon Willighagen</name></author><entry><title type="html">UgiChem2CML</title><link href="https://chem-bla-ics.linkedchemistry.info/2008/08/31/ugichem2cml.html" rel="alternate" type="text/html" title="UgiChem2CML" /><published>2008-08-31T00:00:00+00:00</published><updated>2008-08-31T00:00:00+00:00</updated><id>https://chem-bla-ics.linkedchemistry.info/2008/08/31/ugichem2cml</id><content type="html" xml:base="https://chem-bla-ics.linkedchemistry.info/2008/08/31/ugichem2cml.html"><![CDATA[<p>The nice thing about a hacksession, is that you have something to write about. Below a screenshot of a
<a href="https://en.wikipedia.org/wiki/Ugi_reaction">Ugi reaction</a> in <a href="http://www.bioclipse.net/">Bioclipse</a>…
note the <em>source</em> tab of the editor, which holds the CML. Now, JChemPaint can do reactions too (I did that in 2003
in Peter’s group, but seems to be offline at this moment), but this was the quick hack to do the CMLReact in
<a href="http://docs.google.com/Doc?id=dq5m5bs_12hb8d2wcw">Google Docs</a> (or soon to be):</p>

<p><img src="/assets/images/ugiBioclipse.png" alt="" /></p>

<p>And this is us this afternoon:</p>

<p><img src="/assets/images/CIMG0503_s.JPG" alt="" /></p>]]></content><author><name>Egon Willighagen</name></author><category term="bioclipse" /><category term="cml" /><category term="ugi" /><category term="usefulchem" /><summary type="html"><![CDATA[The nice thing about a hacksession, is that you have something to write about. Below a screenshot of a Ugi reaction in Bioclipse… note the source tab of the editor, which holds the CML. Now, JChemPaint can do reactions too (I did that in 2003 in Peter’s group, but seems to be offline at this moment), but this was the quick hack to do the CMLReact in Google Docs (or soon to be):]]></summary><media:thumbnail xmlns:media="http://search.yahoo.com/mrss/" url="https://chem-bla-ics.linkedchemistry.info/assets/images/CIMG0503_s.JPG" /><media:content medium="image" url="https://chem-bla-ics.linkedchemistry.info/assets/images/CIMG0503_s.JPG" xmlns:media="http://search.yahoo.com/mrss/" /></entry></feed>