{ "version": "https://jsonfeed.org/version/1.1", "title": "chem-bla-ics", "description": "Chemblaics (pronounced chem-bla-ics) is the science that uses open science and computers to solve problems in chemistry, biochemistry and related fields.", "home_page_url": "https://chem-bla-ics.linkedchemistry.info/", "feed_url": "https://chem-bla-ics.linkedchemistry.info/2025/05/12/intoxicom-training-material-collection.json", "icon": "https://chem-bla-ics.linkedchemistry.info/assets/images/chem-bla-ics_logo.png", "language": "en", "authors": [ { "name": "Egon Willighagen", "url": "https://orcid.org/0000-0001-7542-0286", "_orcid": "0000-0001-7542-0286" } ], "items": [ { "id": "https://doi.org/10.59350/t01ew-fed58", "url": "https://chem-bla-ics.linkedchemistry.info/2025/05/12/intoxicom-training-material-collection.html", "title": "INTOXICOM Workshop #4: Training Materials for Toxicology", "content_html": "

INTOXICOM is an ELIXIR Toxicoloy Community (doi:10.12688/f1000research.74502.2)\nimplementation study, organizing five workshops, each\none with a different topic. The first three workshops were in Utrecht\n(doi:10.37044/osf.io/un2rw), Basel, and Uppsala.\nThe fourth workshop\nhas the theme training material and will be held in Birmingham (thanks\nIseult!). And one aspect of that is to make\nexisting training material from toxicology projects indexed and therefore more FAIR.

\n\n

Last week we had a telcon, and I promised to make an overview of some open educational resources\nthat I have (co-)developed over the years. It started during the eNanoMapper project, where\nour Project Technical Adviser was Dr. Cedric Notredame.\nHe commented on us using Word documents for training materials, and that was for me a cue to\nstart using\nGitHub Pages instead. We later reused this for NanoCommons, and by then GitHub Pages had\nbecome common and the foundation for other online material for toxicology projects.

\n\n

Here follows an overview of tutorials I contributed to. Some are already registered\nwith TeSS, but I am sure I will learn a lot of new tricks, and particularly about the\nlearning paths.

\n\n

Hope to see you there! Register here.

\n\n

eNanoMapper

\n\n\n\n

By other eNanoMapper partners:

\n\n\n\n

NanoCommons

\n\n\n\n

By group members:

\n\n\n\n

FAIRplus

\n\n

I add this one as well, as this below recipes were developed for the eTox use case.

\n\n\n\n

VHP4Safety

\n\n\n\n

Many more are listed on the VHP4Safety Docs website.

\n\n\n

References

\n
\n
Martens, M., Lynch, I., Exner, T., Stierum, R., Nymark, P., Martinát, D., Acosta, J. M., Wittig, U., Wittwehr, C., Bünger, M., Abbassi-Daloii, T., Burger, G., Killi, U., Houweling, J., Chowdhury, R. R., Danilyuk, T., Sinke, L., Çınar, O., & Willighagen, E. (2024). INTOXICOM Workshop Report: FAIRification of Toxicological Research Output: Leveraging ELIXIR Resources. Center for Open Science. https://doi.org/10.37044/osf.io/un2rw [cito:citesAsRecommendedReading] CrossRef Scholia
\n
Martens, M., Stierum, R., Schymanski, E. L., Evelo, C. T., Aalizadeh, R., Aladjov, H., Arturi, K., Audouze, K., Babica, P., Berka, K., Bessems, J., Blaha, L., Bolton, E. E., Cases, M., Damalas, D. Ε., Dave, K., Dilger, M., Exner, T., Geerke, D. P., … Willighagen, E. L. (2023). ELIXIR and Toxicology: a community in development. F1000Research, 10, 1129. https://doi.org/10.12688/f1000research.74502.2 [cito:citesAsRecommendedReading] CrossRef Scholia
\n
", "summary": "INTOXICOM is an ELIXIR Toxicoloy Community (doi:10.12688/f1000research.74502.2) implementation study, organizing five workshops, each one with a different topic. The first three workshops were in Utrecht (doi:10.37044/osf.io/un2rw), Basel, and Uppsala. The fourth workshop has the theme training material and will be held in Birmingham (thanks Iseult!). And one aspect of that is to make existing training material from toxicology projects indexed and therefore more FAIR.", "date_published": "2025-05-12T00:00:00+00:00", "date_modified": "2025-05-12T00:00:00+00:00", "tags": ["enanomapper","nanocommons","elixir"], "_references": [ { "url": "https://doi.org/10.12688/f1000research.74502.2", "doi": "10.12688/f1000research.74502.2" , "cito": [ "citesAsRecommendedReading" ] } , { "url": "https://doi.org/10.37044/osf.io/un2rw", "doi": "10.37044/osf.io/un2rw" , "cito": [ "citesAsRecommendedReading" ] } ], "_funding": [{"award": { "title" : "eNanoMapper - A Database and Ontology Framework for Nanomaterials Design and Safety Assessment", "acronym" : "eNanoMapper", "uri" : "cordis.project:604134" }, "funder": { "name": "European Commission", "ror": "00k4n6c32" } },{"award": { "title" : "The European Nanotechnology Community Informatics Platform: Bridging data and disciplinary gaps for industry and regulators", "acronym" : "NanoCommons", "uri" : "cordis.project:731032" }, "funder": { "name": "European Commission", "ror": "00k4n6c32" } },{"award": { "title" : "The Virtual Human Platform for Safety Assessment", "acronym" : "VHP4Safety", "uri" : "drc.filenumber:nwa129219272" }, "funder": { "name": "Dutch Research Council", "ror": "04jsz6e67" } }], "authors": [ { "name": "Egon Willighagen", "url": "https://orcid.org/0000-0001-7542-0286" } ] } ] }