{
  "version": "https://jsonfeed.org/version/1.1",
  "title": "chem-bla-ics",
  "description": "Chemblaics (pronounced chem-bla-ics) is the science that uses open science and computers to solve problems in chemistry, biochemistry and related fields.",
  "home_page_url": "https://chem-bla-ics.linkedchemistry.info/",
  "feed_url": "https://chem-bla-ics.linkedchemistry.info/2019/03/30/what-metabolites-are-found-in-which.json",
  "icon": "https://chem-bla-ics.linkedchemistry.info/assets/images/chem-bla-ics_logo.png",
  "language": "en",
  "authors": [
    {
      "name": "Egon Willighagen",
      "url": "https://orcid.org/0000-0001-7542-0286",
      "_orcid": "0000-0001-7542-0286"
    }
  ],
  "items": [

    {
      "id": "https://doi.org/10.59350/c7db7-70j94",
      "url": "https://chem-bla-ics.linkedchemistry.info/2019/03/30/what-metabolites-are-found-in-which.html",
      "title": "What metabolites are found in which species? Nanopublications from Wikidata",
      "content_html": "<p>In December I reported about Groovy <a href=\"https://chem-bla-ics.linkedchemistry.info/2018/12/27/creating-nanopublications-with-groovy.html\">code to create nanopublications <i class=\"fa-solid fa-recycle fa-xs\"></i></a>.\nThis has been running for some time now, extracting nanopubs that assert that some\nmetabolite is found in some species. I send the resulting nanopubs to\n<a href=\"https://scholia.toolforge.org/author/Q42027946\">Tobias Kuhn <i class=\"fa-solid fa-recycle fa-xs\"></i></a>, to populate his\n<em>Growing Resource of Provenance-Centric Scientific Linked Data</em>\n(doi:<a href=\"https://doi.org/10.1109/eScience.2018.00024\">10.1109/eScience.2018.00024</a>,\n<a href=\"https://arxiv.org/pdf/1809.06532.pdf\">PDF</a>).</p>\n\n<p>Each data set comes with <a href=\"http://np.inn.ac/RA6KPZ2qS8joGDOA9EvfcNHeNsg6nI2_T1YePsYMjL9io\">an index pointing to the individual nanopubs</a>,\nand that looks like this:</p>\n\n<p><img src=\"/assets/images/nanopubs.png\" alt=\"\" /></p>\n\n<p>I wonder what options I have to to archive the full set up nanopublications on\nFigshare or Zenodo, and see that DOI show up here…</p>\n\n<h4>References</h4>\n<div class=\"csl-bib-body\">\n    <div class=\"csl-entry\">Kuhn, T., Banda, J. M., Willighagen, E., Ehrhart, F., Evelo, C., Malas, T. B., Dumontier, M., Merono-Penuela, A., Malic, A., Poelen, J. H., Hurlbert, A. H., Centeno Ortiz, E., Furlong, L. I., Queralt-Rosinach, N., &#38; Chichester, C. (2018). Nanopublications: A Growing Resource of Provenance-Centric Scientific Linked Data. <i>2018 IEEE 14th International Conference on E-Science (e-Science)</i>, 83–92. https://doi.org/10.1109/escience.2018.00024 <a href=\"https://doi.org/10.1109/ESCIENCE.2018.00024\">CrossRef</a> <a href=\"https://qlever.scholia.wiki/doi/10.1109/ESCIENCE.2018.00024\">Scholia</a></div>\n  </div>",
      "summary": "In December I reported about Groovy code to create nanopublications . This has been running for some time now, extracting nanopubs that assert that some metabolite is found in some species. I send the resulting nanopubs to Tobias Kuhn , to populate his Growing Resource of Provenance-Centric Scientific Linked Data (doi:10.1109/eScience.2018.00024, PDF).",
      "image": "https://chem-bla-ics.linkedchemistry.info/assets/images/nanopubs.png",
      "date_published": "2019-03-30T00:00:00+00:00",
      "date_modified": "2025-02-16T00:00:00+00:00",
      "tags": ["nanopub","cheminf","wikidata"],
      "_references": [
        
          
          
            { "url": "https://doi.org/10.1109/ESCIENCE.2018.00024", "doi": "10.1109/ESCIENCE.2018.00024"
             }
            
          
        ],
      
      
      
      
      
      
        "authors": [ { "name": "Egon Willighagen", "url": "https://orcid.org/0000-0001-7542-0286" } ]
      
    }

  ]
}