{
  "version": "https://jsonfeed.org/version/1.1",
  "title": "chem-bla-ics",
  "description": "Chemblaics (pronounced chem-bla-ics) is the science that uses open science and computers to solve problems in chemistry, biochemistry and related fields.",
  "home_page_url": "https://chem-bla-ics.linkedchemistry.info/",
  "feed_url": "https://chem-bla-ics.linkedchemistry.info/2011/11/01/oscar4-paper-text-mining-in-bioclipse.json",
  "icon": "https://chem-bla-ics.linkedchemistry.info/assets/images/chem-bla-ics_logo.png",
  "language": "en",
  "authors": [
    {
      "name": "Egon Willighagen",
      "url": "https://orcid.org/0000-0001-7542-0286",
      "_orcid": "0000-0001-7542-0286"
    }
  ],
  "items": [

    {
      "id": "https://doi.org/10.59350/rz0tz-3wa91",
      "url": "https://chem-bla-ics.linkedchemistry.info/2011/11/01/oscar4-paper-text-mining-in-bioclipse.html",
      "title": "Oscar4 paper: text mining in Bioclipse (and everywhere else, of course)",
      "content_html": "<p>The <a href=\"http://www.jcheminf.com/content/3/1/41\">Oscar4 paper</a> (CC-BY, just like the screenshots of the paper below) was out already some days now, but the formatting has finished:</p>\n\n<p><img src=\"/assets/images/oscar4Paper.png\" alt=\"\" /></p>\n\n<p>I spotted a rogue <code class=\"language-plaintext highlighter-rouge\">http://</code> in the code example b) in <a href=\"http://www.jcheminf.com/content/3/1/41#IDAE2JBD\">Appendix B</a>:</p>\n\n<p><img src=\"/assets/images/oscar4Paper2.png\" alt=\"\" /></p>\n\n<p>I’ll see what I can do about that, but the API might evolve a bit anyway.</p>\n\n<p>That leaves me to mention that <a href=\"https://chem-bla-ics.linkedchemistry.info/2011/09/27/almost-year-ago-i-started-position-with.html\">Bioclipse has an Oscar extension <i class=\"fa-solid fa-recycle fa-xs\"></i></a>\n(<a href=\"http://www.bioclipse.net/\">Bioclipse</a> has a lot of functionality nowadays, in fact),\nand that I <a href=\"https://chem-bla-ics.linkedchemistry.info/2010/12/30/text-mining-chemistry-from-dutch-or.html\">blogged several times on Oscar4 <i class=\"fa-solid fa-recycle fa-xs\"></i></a>\nwhen I was working with the other authors on the refactoring last year.</p>\n\n<h4>References</h4>\n<div class=\"csl-bib-body\">\n    <div class=\"csl-entry\">Jessop, D. M., Adams, S. E., Willighagen, E. L., Hawizy, L., &#38; Murray-Rust, P. (2011). OSCAR4: a flexible architecture for chemical text-mining. <i>Journal of Cheminformatics</i>, <i>3</i>(1). https://doi.org/10.1186/1758-2946-3-41 <a href=\"https://doi.org/10.1186/1758-2946-3-41\">CrossRef</a> <a href=\"https://qlever.scholia.wiki/doi/10.1186/1758-2946-3-41\">Scholia</a></div>\n  </div>",
      "summary": "The Oscar4 paper (CC-BY, just like the screenshots of the paper below) was out already some days now, but the formatting has finished:",
      "image": "https://chem-bla-ics.linkedchemistry.info/assets/images/oscar4Paper.png",
      "date_published": "2011-11-01T00:00:00+00:00",
      "date_modified": "2026-09-27T00:00:00+00:00",
      "tags": ["oscar","bioclipse","myexperiment"],
      "_references": [
        
          
          
            { "url": "https://doi.org/10.1186/1758-2946-3-41", "doi": "10.1186/1758-2946-3-41"
             }
            
          
        ],
      
      
      
      
      
      
        "authors": [ { "name": "Egon Willighagen", "url": "https://orcid.org/0000-0001-7542-0286" } ]
      
    }

  ]
}