{ "version": "https://jsonfeed.org/version/1.1", "title": "chem-bla-ics", "description": "Chemblaics (pronounced chem-bla-ics) is the science that uses open science and computers to solve problems in chemistry, biochemistry and related fields.", "home_page_url": "https://chem-bla-ics.linkedchemistry.info/", "feed_url": "https://chem-bla-ics.linkedchemistry.info/2010/02/09/chembl-rdf-1sparql-end-point.json", "icon": "https://chem-bla-ics.linkedchemistry.info/assets/images/chem-bla-ics_logo.png", "language": "en", "authors": [ { "name": "Egon Willighagen", "url": "https://orcid.org/0000-0001-7542-0286", "_orcid": "0000-0001-7542-0286" } ], "items": [ { "id": "https://doi.org/10.59350/1g80w-92w22", "url": "https://chem-bla-ics.linkedchemistry.info/2010/02/09/chembl-rdf-1sparql-end-point.html", "title": "ChEMBL RDF #1:SPARQL end point", "content_html": "

In a series \nof \nSPARQL end points ,\nI am happy to present a new Virtuoso 6.1-hosted\nSPARQL end point for the ChEMBL database (CC-BY-SA),\nat our groups new rdf.farmbio.uu.se server. The server is hosting\n23.8M triples,\nwith the data based on ChEMBL 02.\nThere is a SPARQL end point, as well as a\nSNORQL interface:

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There are 2.4M activities,\n34k papers,\n517k compounds,\n416k assays,\nassociated with 7k targets\n(proteins etc):

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I will not discuss any cool mashups with the rich data set and Bioclipse,\nas that is the main topic my student Annzi’s Masters project.

", "summary": "In a series of SPARQL end points , I am happy to present a new Virtuoso 6.1-hosted SPARQL end point for the ChEMBL database (CC-BY-SA), at our groups new rdf.farmbio.uu.se server. The server is hosting 23.8M triples, with the data based on ChEMBL 02. There is a SPARQL end point, as well as a SNORQL interface:", "image": "https://chem-bla-ics.linkedchemistry.info/assets/images/chemblSnorQL.png", "date_published": "2010-02-09T00:00:00+00:00", "date_modified": "2026-05-05T00:00:00+00:00", "tags": ["rdf","chembl","sparql"], "authors": [ { "name": "Egon Willighagen", "url": "https://orcid.org/0000-0001-7542-0286" } ] } ] }