{
  "version": "https://jsonfeed.org/version/1.1",
  "title": "chem-bla-ics",
  "description": "Chemblaics (pronounced chem-bla-ics) is the science that uses open science and computers to solve problems in chemistry, biochemistry and related fields.",
  "home_page_url": "https://chem-bla-ics.linkedchemistry.info/",
  "feed_url": "https://chem-bla-ics.linkedchemistry.info/2009/07/02/bioclipse-for-cdk-developers-2.json",
  "icon": "https://chem-bla-ics.linkedchemistry.info/assets/images/chem-bla-ics_logo.png",
  "language": "en",
  "authors": [
    {
      "name": "Egon Willighagen",
      "url": "https://orcid.org/0000-0001-7542-0286",
      "_orcid": "0000-0001-7542-0286"
    }
  ],
  "items": [

    {
      "id": "https://doi.org/10.59350/gq1ew-ehp14",
      "url": "https://chem-bla-ics.linkedchemistry.info/2009/07/02/bioclipse-for-cdk-developers-2.html",
      "title": "Bioclipse for CDK Developers #2",
      "content_html": "<p>I <a href=\"https://chem-bla-ics.linkedchemistry.info/2009/02/15/bioclipse-for-cdk-developers-1.html\">reported earlier <i class=\"fa-solid fa-recycle fa-xs\"></i></a> how <a href=\"http://www.bioclipse.net/\">Bioclipse</a>\nallows you to use a script to perceive atom types for the content of the JChemPaint RCP editor. This functionality is now available in the\noutline, and indicates directly if Bioclipse (and the underlying <a href=\"http://cdk.sf.net/\">CDK</a>) understands the chemistry you are drawing. In a\nfuture Bioclipse release, these <em>problems</em> will be visualized more prominently, likely using the Errors/Problems Views available from Eclipse, or otherwise.</p>\n\n<p><img src=\"/assets/images/atomTyping.png\" alt=\"\" /></p>",
      "summary": "I reported earlier how Bioclipse allows you to use a script to perceive atom types for the content of the JChemPaint RCP editor. This functionality is now available in the outline, and indicates directly if Bioclipse (and the underlying CDK) understands the chemistry you are drawing. In a future Bioclipse release, these problems will be visualized more prominently, likely using the Errors/Problems Views available from Eclipse, or otherwise.",
      "image": "https://chem-bla-ics.linkedchemistry.info/assets/images/atomTyping.png",
      "date_published": "2009-07-02T00:00:00+00:00",
      "date_modified": "2026-03-07T00:00:00+00:00",
      "tags": ["cdk","bioclipse"],
      
      
      
      
      
      
        "authors": [ { "name": "Egon Willighagen", "url": "https://orcid.org/0000-0001-7542-0286" } ]
      
    }

  ]
}