{ "version": "https://jsonfeed.org/version/1.1", "title": "chem-bla-ics", "description": "Chemblaics (pronounced chem-bla-ics) is the science that uses open science and computers to solve problems in chemistry, biochemistry and related fields.", "home_page_url": "https://chem-bla-ics.linkedchemistry.info/", "feed_url": "https://chem-bla-ics.linkedchemistry.info/2008/04/07/legal-advice-needed-nih-restricting.json", "icon": "https://chem-bla-ics.linkedchemistry.info/assets/images/chem-bla-ics_logo.png", "language": "en", "authors": [ { "name": "Egon Willighagen", "url": "https://orcid.org/0000-0001-7542-0286", "_orcid": "0000-0001-7542-0286" } ], "items": [ { "id": "https://doi.org/10.59350/865j7-crn03", "url": "https://chem-bla-ics.linkedchemistry.info/2008/04/07/legal-advice-needed-nih-restricting.html", "title": "Legal Advice Needed: the NIH restricting access to our CC-licensed research results", "content_html": "

In reply to Peter’s news\nthat the NIH’s PubMed Central (PMC) does not allow machine retrieval of content, I was wondering\nabout this section in the CC license of much of the PMC content, such as our paper on userscripts\n(section 4a of the CC-BY 2.0):

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You may not distribute, publicly display, publicly perform, or publicly digitally perform the Work with any technological measures\nthat control access or use of the Work in a manner inconsistent with the terms of this License Agreement.

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CC-BY 3.0 reads differently, but has similar aims.

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Let me make clear that I value machine readable publications much more than free (gratis, as-in-free-beer) publications. Now, the\nNIH initiative now just is ‘Free Access’. An interesting step, but not one I care much about; not in relation to science anyway.

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Now, Peter indicates that the NIH has put in place ‘technological measures to control access’ to the distribution of\nour work on userscripts \n(the PMC entry). That is in clear violation\nof the CC license.

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I know that other NIH initiatives do allow this, such as PMC OAI, but that’s just an ‘auxiliary service’. It may come down\nto technical details, but some text on the PMC website is at least inaccurate:

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Crawlers and other automated processes may NOT be used to systematically retrieve batches of articles from the PMC web site.\nBulk downloading of articles from the main PMC web site, in any way, is prohibited because of copyright restrictions.

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They way it is described right now, it is like: You may not drive a car. Next paragraph. But, if you have a driver license,\nwe will approve. Or, translated to this example: You may only use this and that article, but only a few of them.\nNext paragraph. Unless you use the following technical hole in the measure we took to disallow you access.

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What the PMC website should indicate, instead, is that text mining is allowed for the PMC OAI subset, but that they would highly\nprefer to use the PMC OAI or PMC FTP routes. This is the least they have to do.

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No matter what, I still have the feeling that any technical obstacles are disallowed by the CC-license. Any legal expert here,\nthat can explain me if the CC license allows controlling how people have access to my material?

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References

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Willighagen, E. L., O’Boyle, N. M., Gopalakrishnan, H., Jiao, D., Guha, R., Steinbeck, C., & Wild, D. J. (2007). Userscripts for the Life Sciences. BMC Bioinformatics, 8(1). https://doi.org/10.1186/1471-2105-8-487 CrossRef Scholia
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", "summary": "In reply to Peter’s news that the NIH’s PubMed Central (PMC) does not allow machine retrieval of content, I was wondering about this section in the CC license of much of the PMC content, such as our paper on userscripts (section 4a of the CC-BY 2.0):", "date_published": "2008-04-07T00:00:00+00:00", "date_modified": "2025-10-11T00:00:00+00:00", "tags": ["pubmed","pmc","copyright"], "_references": [ { "url": "https://doi.org/10.1186/1471-2105-8-487", "doi": "10.1186/1471-2105-8-487" } ], "authors": [ { "name": "Egon Willighagen", "url": "https://orcid.org/0000-0001-7542-0286" } ] } ] }