{
  "version": "https://jsonfeed.org/version/1.1",
  "title": "chem-bla-ics",
  "description": "Chemblaics (pronounced chem-bla-ics) is the science that uses open science and computers to solve problems in chemistry, biochemistry and related fields.",
  "home_page_url": "https://chem-bla-ics.linkedchemistry.info/",
  "feed_url": "https://chem-bla-ics.linkedchemistry.info/2007/11/27/be-in-my-advisory-board-1-being-good.json",
  "icon": "https://chem-bla-ics.linkedchemistry.info/assets/images/chem-bla-ics_logo.png",
  "language": "en",
  "authors": [
    {
      "name": "Egon Willighagen",
      "url": "https://orcid.org/0000-0001-7542-0286",
      "_orcid": "0000-0001-7542-0286"
    }
  ],
  "items": [

    {
      "id": "https://doi.org/10.59350/e298f-r8n49",
      "url": "https://chem-bla-ics.linkedchemistry.info/2007/11/27/be-in-my-advisory-board-1-being-good.html",
      "title": "Be in my Advisory Board #1: being a good Open Science citizen",
      "content_html": "<p>I recently saw that blogger.com blogs gained <a href=\"http://buzz.blogger.com/2007/07/polls-out-of-draft.html\">a poll feature</a>.\nFrom now on, I will try to be a bit more Open Science, in addition to Open Source. From now on, <em>you</em> can be in my\nAdvisory Board. To do so, vote on my next chemblaics (aka Open Source Chemoinformatics) project. The poll can be found on\nthe left side of this blog. Associated which each poll, which I may run more or less frequently depending on the time of\nyear, will be one blog post where I introduce the options. Options not mentioned, or completely different things,\nyou would like to suggest me to do, can be left as comments to these items.</p>\n\n<h2 id=\"finishing-the-new-jchempaint-code\">Finishing the new JChemPaint code</h2>\n<p>Goal of this option is to use the <a href=\"http://progz-jchem.blogspot.com/\">code written by Niels</a> in his\n<a href=\"http://www.programmeerzomer.nl/\">ProgrammeerZomer</a> project to implement a new JChemPaint based on Java2D and\nindependent of the widget set used (Swing/AWT/SWT/…).</p>\n\n<h2 id=\"cml-roundtripping-of-the-cdk-data-model\">CML-roundtripping of the CDK data model</h2>\n<p>The goal of this project is to ensure that all information the CDK data model can hold can be roundtripped in\n<a href=\"http://en.wikipedia.org/wiki/Chemical_Markup_Language\">CML</a>.</p>\n\n<p>##Integrating InChI-NestedVM in Bioclipse\n<a href=\"http://depth-first.com/\">Rich</a> is, besides an excellent blogger, also someone who is not afraid to try new things.\nRecently, he experimented with compiling the <a href=\"https://doi.org/10.59350/vhefz-rc472\">InChI library into a Java executable <i class=\"fa-solid fa-recycle fa-xs\"></i></a>.\n<a href=\"http://www.bioclipse.net/\">Bioclipse</a> already is able to generate <a href=\"http://iupac.org/inchi/\">InChI</a>s,\nusing the code written by Sam Adams for the <a href=\"http://cdk.sf.net/\">CDK</a>, but a InChI/NestedVM plugin for Bioclipse\ncould make a nice show case.</p>\n\n<h2 id=\"writing-cdk-news-articles\">Writing CDK News articles</h2>\n<p>On the other hand, you might find that I should focus on getting a new <a href=\"http://cdknews.org/\">CDK News</a> issue out,\nfor which we are stilling lacking (finished) contributions.</p>\n\n<p>It’s up to you. Deadline in about two weeks; still got some other things to finish :)</p>\n\n<h4>References</h4>\n<div class=\"csl-bib-body\">\n    <div class=\"csl-entry\">Apodaca, R. (2007). <i>JInChI - Run InChI Anywhere Java Runs</i>. Crossref. https://doi.org/10.59350/vhefz-rc472 <a href=\"https://doi.org/10.59350/vhefz-rc472\">CrossRef</a> <a href=\"https://qlever.scholia.wiki/doi/10.59350/vhefz-rc472\">Scholia</a></div>\n  </div>",
      "summary": "I recently saw that blogger.com blogs gained a poll feature. From now on, I will try to be a bit more Open Science, in addition to Open Source. From now on, you can be in my Advisory Board. To do so, vote on my next chemblaics (aka Open Source Chemoinformatics) project. The poll can be found on the left side of this blog. Associated which each poll, which I may run more or less frequently depending on the time of year, will be one blog post where I introduce the options. Options not mentioned, or completely different things, you would like to suggest me to do, can be left as comments to these items.",
      
      "date_published": "2007-11-27T00:00:00+00:00",
      "date_modified": "2025-04-12T00:00:00+00:00",
      
      "_references": [
        
          
          
            { "url": "https://doi.org/10.59350/vhefz-rc472", "doi": "10.59350/vhefz-rc472"
             }
            
          
        ],
      
      
      
      
      
      
        "authors": [ { "name": "Egon Willighagen", "url": "https://orcid.org/0000-0001-7542-0286" } ]
      
    }

  ]
}