{
  "version": "https://jsonfeed.org/version/1.1",
  "title": "chem-bla-ics",
  "description": "Chemblaics (pronounced chem-bla-ics) is the science that uses open science and computers to solve problems in chemistry, biochemistry and related fields.",
  "home_page_url": "https://chem-bla-ics.linkedchemistry.info/",
  "feed_url": "https://chem-bla-ics.linkedchemistry.info/2006/09/14/complex-pdb-documents-using-bioclipse.json",
  "icon": "https://chem-bla-ics.linkedchemistry.info/assets/images/chem-bla-ics_logo.png",
  "language": "en",
  "authors": [
    {
      "name": "Egon Willighagen",
      "url": "https://orcid.org/0000-0001-7542-0286",
      "_orcid": "0000-0001-7542-0286"
    }
  ],
  "items": [

    {
      "id": "https://doi.org/10.59350/b3zbn-9w223",
      "url": "https://chem-bla-ics.linkedchemistry.info/2006/09/14/complex-pdb-documents-using-bioclipse.html",
      "title": "Complex PDB documents using the Bioclipse ChildResourceCreator",
      "content_html": "<p>Some time ago I blogged about the <a href=\"https://chem-bla-ics.linkedchemistry.info/2006/08/22/bioclipse-gets-new-extension-point.html\">ChildResourceCreator extension point in Bioclipse <i class=\"fa-solid fa-recycle fa-xs\"></i></a>\nand hinted as using that for <a href=\"http://www.rcsb.org/pdb/\">PDB files</a>. which contain 3D molecular models, sequences and bibliographic information. Using the new extension point,\n<a href=\"http://www.bioclipse.net/\">Bioclipse</a> now treats PDB files as complex documents, creating child resources for the 3D molecular model (using the\n<a href=\"http://cdk.sf.net/\">CDK</a> plugin), and a sequence resource (using the <a href=\"http://www.biojava.org/\">BioJava</a> plugin).</p>\n\n<p><img src=\"/assets/images/bioclipseBioJavaSupport.png\" alt=\"\" /></p>",
      "summary": "Some time ago I blogged about the ChildResourceCreator extension point in Bioclipse and hinted as using that for PDB files. which contain 3D molecular models, sequences and bibliographic information. Using the new extension point, Bioclipse now treats PDB files as complex documents, creating child resources for the 3D molecular model (using the CDK plugin), and a sequence resource (using the BioJava plugin).",
      "image": "https://chem-bla-ics.linkedchemistry.info/assets/images/bioclipseBioJavaSupport.png",
      "date_published": "2006-09-14T00:00:00+00:00",
      "date_modified": "2024-12-29T00:00:00+00:00",
      "tags": ["bioclipse","biojava","cdk","pdb","jmol"],
      
      
      
      
      
      
        "authors": [ { "name": "Egon Willighagen", "url": "https://orcid.org/0000-0001-7542-0286" } ]
      
    }

  ]
}