{
  "version": "https://jsonfeed.org/version/1.1",
  "title": "chem-bla-ics",
  "description": "Chemblaics (pronounced chem-bla-ics) is the science that uses open science and computers to solve problems in chemistry, biochemistry and related fields.",
  "home_page_url": "https://chem-bla-ics.linkedchemistry.info/",
  "feed_url": "https://chem-bla-ics.linkedchemistry.info/2005/11/18/goal-live-chemblaics-cd.json",
  "icon": "https://chem-bla-ics.linkedchemistry.info/assets/images/chem-bla-ics_logo.png",
  "language": "en",
  "authors": [
    {
      "name": "Egon Willighagen",
      "url": "https://orcid.org/0000-0001-7542-0286",
      "_orcid": "0000-0001-7542-0286"
    }
  ],
  "items": [

    {
      "id": "https://doi.org/10.59350/e2cdx-9q525",
      "url": "https://chem-bla-ics.linkedchemistry.info/2005/11/18/goal-live-chemblaics-cd.html",
      "title": "The goal: a live chemblaics CD",
      "content_html": "<p>This evening I have been looking at with the <a href=\"http://www.knoppix.net/\">KNOPPIX</a> customization howto, and ran many of the interesting commands.\nI’ve setup a environment with Kalzium, OpenBabel, CDK, jython, <a href=\"http://pymol.sourceforge.net/\">PyMOL</a>, and for development I included gcj and\nEclipse. At some later point I will include kfile_chemical too, but I want to make a deb package first.</p>\n\n<p>Moreover, I also wanted it to include JChemPaint, Jmol and <a href=\"http://taverna.sourceforge.net/\">Taverna</a> (with the CDK extension). However, these\ndepend on Swing, which is not suffiently provided by open source java virtual machines. I attempted gij 4.0, <a href=\"http://www.kaffe.org/\">kaffe</a>\nand <a href=\"http://sablevm.org/\">sablevm</a>, all without success.</p>\n\n<p>A live CD with all the open source chemo- and bioinformatics tools would be a real killer. We could take a burned live CD with us to conferences\nand have others run our software on their laptop! But we need to stop use Swing. Fortunately, there seems to be a serious project going on to\nport JChemPaint and Jmol to a free Java GUI environment, so maybe we can have the live CD up and going before the 2006 conferences start.</p>",
      "summary": "This evening I have been looking at with the KNOPPIX customization howto, and ran many of the interesting commands. I’ve setup a environment with Kalzium, OpenBabel, CDK, jython, PyMOL, and for development I included gcj and Eclipse. At some later point I will include kfile_chemical too, but I want to make a deb package first.",
      
      "date_published": "2005-11-18T00:00:00+00:00",
      "date_modified": "2005-11-18T00:00:00+00:00",
      "tags": ["cheminf","linux","java","workflow"],
      
      
      
      
      
      
        "authors": [ { "name": "Egon Willighagen", "url": "https://orcid.org/0000-0001-7542-0286" } ]
      
    }

  ]
}